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Gene/Protein Characteristic Table for FLJ00284

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Product ID	ORK07481
Accession No	AK160369
Clone name	sh02281
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4885 bp) Predicted protein sequence (366 aa)
Source	Human spleen

Length: 4885 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 366 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR007086	169	182	PR00048	Zn-finger
	IPR007086	268	277	PR00048	Zn-finger
HMMPfam	IPR007087	170	192	PF00096	Zn-finger
	IPR007087	197	219	PF00096	Zn-finger
	IPR007087	225	247	PF00096	Zn-finger
	IPR007087	253	275	PF00096	Zn-finger
	IPR007087	281	302	PF00096	Zn-finger
	IPR007087	308	330	PF00096	Zn-finger
	IPR007087	336	359	PF00096	Zn-finger
HMMSmart	IPR007087	170	192	SM00355	Zn-finger
	IPR007087	197	219	SM00355	Zn-finger
	IPR007087	225	247	SM00355	Zn-finger
	IPR007087	253	275	SM00355	Zn-finger
	IPR007087	281	302	SM00355	Zn-finger
	IPR007087	308	330	SM00355	Zn-finger
	IPR007087	336	359	SM00355	Zn-finger
ProfileScan	IPR007087	170	197	PS50157	Zn-finger
	IPR007087	197	224	PS50157	Zn-finger
	IPR007087	225	252	PS50157	Zn-finger
	IPR007087	253	280	PS50157	Zn-finger
	IPR007087	281	307	PS50157	Zn-finger
	IPR007087	308	335	PS50157	Zn-finger
	IPR007087	336	363	PS50157	Zn-finger
ScanRegExp	IPR007087	172	192	PS00028	Zn-finger
	IPR007087	199	219	PS00028	Zn-finger
	IPR007087	227	247	PS00028	Zn-finger
	IPR007087	255	275	PS00028	Zn-finger
	IPR007087	310	330	PS00028	Zn-finger
	IPR007087	338	359	PS00028	Zn-finger

Experimental conditions

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