Gene/Protein Characteristic Table for FLJ00143
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Product ID ORK05093
Accession No AK074072
Clone name sh04531
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5496 bp)
Predicted protein sequence (373 aa)
Source Human spleen
Features of the cloned cDNA sequence
Description

Length: 5496 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Features of the protein sequence
Description

Length: 373 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAB84898 1.9e-135 100.0 FLJ00143 protei...
Homo sapiens
Q8TEQ0 2.1e-135 100.0 Sorting nexin-29.
Homo sapiens
EAW85124 3.6e-135 100.0 hCG2042874, iso...
Homo sapiens
AAI56064 1.1e-134 99.7 Sorting nexin 2...
synthetic construct
XP_001141023 2.9e-134 99.5 similar to FLJ0...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001683 223 329 PF00787 Phox-like
HMMSmart IPR001683 218 321 SM00312 Phox-like
ProfileScan IPR001683 216 339 PS50195 Phox-like
Experimental conditions
Primer_f
Primer_r
PCR conditions test
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