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Gene/Protein Characteristic Table for FLJ00309

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Product ID	ORK07497
Accession No	AK160374
Clone name	sh05969
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (5731 bp) Predicted protein sequence (564 aa)
Source	Human spleen

Length: 5731 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 564 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
BlastProDom	IPR007087	257	280	PD000003	Zn-finger
	IPR007087	285	308	PD000003	Zn-finger
	IPR007087	341	364	PD000003	Zn-finger
	IPR007087	369	392	PD000003	Zn-finger
	IPR007087	397	420	PD000003	Zn-finger
	IPR007087	425	448	PD000003	Zn-finger
	IPR007087	481	504	PD000003	Zn-finger
	IPR007087	509	532	PD000003	Zn-finger
FPrintScan	IPR007086	312	325	PR00048	Zn-finger
	IPR007086	412	421	PR00048	Zn-finger
HMMPfam	IPR001909	4	44	PF01352	KRAB box
	IPR007087	81	103	PF00096	Zn-finger
	IPR007087	229	251	PF00096	Zn-finger
	IPR007087	257	279	PF00096	Zn-finger
	IPR007087	285	307	PF00096	Zn-finger
	IPR007087	313	335	PF00096	Zn-finger
	IPR007087	341	363	PF00096	Zn-finger
	IPR007087	369	391	PF00096	Zn-finger
	IPR007087	397	419	PF00096	Zn-finger
	IPR007087	425	447	PF00096	Zn-finger
	IPR007087	453	475	PF00096	Zn-finger
	IPR007087	481	503	PF00096	Zn-finger
	IPR007087	509	531	PF00096	Zn-finger
	IPR007087	537	559	PF00096	Zn-finger
HMMSmart	IPR001909	4	64	SM00349	KRAB box
	IPR007087	81	103	SM00355	Zn-finger
	IPR007087	229	251	SM00355	Zn-finger
	IPR007087	257	279	SM00355	Zn-finger
	IPR007087	285	307	SM00355	Zn-finger
	IPR007087	313	335	SM00355	Zn-finger
	IPR007087	341	363	SM00355	Zn-finger
	IPR007087	369	391	SM00355	Zn-finger
	IPR007087	397	419	SM00355	Zn-finger
	IPR007087	425	447	SM00355	Zn-finger
	IPR007087	453	475	SM00355	Zn-finger
	IPR007087	481	503	SM00355	Zn-finger
	IPR007087	509	531	SM00355	Zn-finger
	IPR007087	537	559	SM00355	Zn-finger
ProfileScan	IPR001909	4	77	PS50805	KRAB box
	IPR007087	109	136	PS50157	Zn-finger
	IPR007087	229	256	PS50157	Zn-finger
	IPR007087	257	284	PS50157	Zn-finger
	IPR007087	285	312	PS50157	Zn-finger
	IPR007087	313	340	PS50157	Zn-finger
	IPR007087	341	368	PS50157	Zn-finger
	IPR007087	369	396	PS50157	Zn-finger
	IPR007087	397	424	PS50157	Zn-finger
	IPR007087	425	452	PS50157	Zn-finger
	IPR007087	453	480	PS50157	Zn-finger
	IPR007087	481	508	PS50157	Zn-finger
	IPR007087	509	536	PS50157	Zn-finger
	IPR007087	537	564	PS50157	Zn-finger
ScanRegExp	IPR007087	83	104	PS00028	Zn-finger
	IPR007087	231	251	PS00028	Zn-finger
	IPR007087	259	279	PS00028	Zn-finger
	IPR007087	287	307	PS00028	Zn-finger
	IPR007087	315	335	PS00028	Zn-finger
	IPR007087	343	363	PS00028	Zn-finger
	IPR007087	371	391	PS00028	Zn-finger
	IPR007087	399	419	PS00028	Zn-finger
	IPR007087	427	447	PS00028	Zn-finger
	IPR007087	455	475	PS00028	Zn-finger
	IPR007087	483	503	PS00028	Zn-finger
	IPR007087	511	531	PS00028	Zn-finger
	IPR007087	539	559	PS00028	Zn-finger

Experimental conditions

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