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Gene/Protein Characteristic Table for KIAA0424

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Product ID	ORK00073
Accession No	AB007884
Description	Cdc42 guanine nucleotide exchange factor (GEF) 9, transcript variant 1
Clone name	hh01267
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (5413 bp) Predicted protein sequence (567 aa)
HaloTag ORF Clone	FHC00073
Flexi ORF Clone	FXC00073
Source	Human adult brain
Rouge ID	mKIAA0424 by Kazusa Mouse cDNA Project

Length: 5413 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis). Integrity of 3' end

Length: 567 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
BlastProDom	IPR001452	65	113	PD000066	Src homology-3
FPrintScan	IPR001452	76	91	PR00452	Src homology-3
	IPR001452	93	102	PR00452	Src homology-3
	IPR001452	104	116	PR00452	Src homology-3
HMMPfam	IPR001452	77	116	PF00018	Src homology-3
	IPR000219	158	337	PF00621	DH
	IPR001849	370	476	PF00169	Pleckstrin-like
HMMSmart	IPR001452	62	117	SM00326	Src homology-3
	IPR000219	158	337	SM00325	DH
	IPR001849	370	478	SM00233	Pleckstrin-like
ProfileScan	IPR001452	59	118	PS50002	Src homology-3
	IPR000219	154	338	PS50010	DH
	IPR001849	369	476	PS50003	Pleckstrin-like

RT-PCR

Experimental conditions

Chromosome No. X
Experimental conditions

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