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Gene/Protein Characteristic Table for KIAA0677

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Product ID	ORK00602
Accession No	AB014577
Description	lysine (K)-specific demethylase 4A
Clone name	hk02635
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4417 bp) Predicted protein sequence (1073 aa)
HaloTag ORF Clone	FHC00602
Flexi ORF Clone	FXC00602
Source	Human adult brain
Rouge ID	mKIAA0677 by Kazusa Mouse cDNA Project

Length: 4417 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1073 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR003349	24	69	PF02375	Transcription factor jumonji
	IPR013129	184	300	PF02373	Transcription factor jumonji
	IPR001965	744	778	PF00628	Zinc finger
HMMSmart	IPR003349	22	64	SM00545	Transcription factor jumonji
	IPR003347	151	317	SM00558	Transcription factor jumonji/aspartyl beta-hydroxylase
	IPR001965	718	776	SM00249	Zinc finger
	IPR001965	838	894	SM00249	Zinc finger
	IPR002999	906	963	SM00333	Tudor
	IPR002999	964	1020	SM00333	Tudor
ProfileScan	IPR003349	23	65	PS51183	Transcription factor jumonji
	IPR003347	151	317	PS51184	Transcription factor jumonji/aspartyl beta-hydroxylase

RT-PCR

Experimental conditions

Chromosome No. 1
Experimental conditions

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