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Gene/Protein Characteristic Table for FLJ00090

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Product ID	ORK05068
Accession No	AK074038
Clone name	as00090
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4213 bp) Predicted protein sequence (770 aa)
Source	Human spleen

Length: 4213 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 770 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	NULL	704	770	PF07647	NULL
	IPR001660	705	768	PF00536	Sterile alpha motif SAM
HMMSmart	IPR001660	704	770	SM00454	Sterile alpha motif SAM
ProfileScan	IPR000694	271	388	PS50099	Proline-rich region
	IPR001660	707	770	PS50105	Sterile alpha motif SAM

Experimental conditions

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