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Gene/Protein Characteristic Table for KIAA0400

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Product ID	ORK01973
Accession No	AB007860
Description	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2, transcript variant 1
Clone name	hg01091
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (5711 bp) Predicted protein sequence (1022 aa)
HaloTag ORF Clone	FHC01973
Flexi ORF Clone	FXC01973
Source	Human adult brain
Rouge ID	mKIAA0400 by Kazusa Mouse cDNA Project

Length: 5711 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1022 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
BlastProDom	IPR001452	963	1017	PD000066	Src homology-3
FPrintScan	IPR001164	449	468	PR00405	Arf GTPase activating protein
	IPR001164	468	485	PR00405	Arf GTPase activating protein
	IPR001164	489	510	PR00405	Arf GTPase activating protein
	IPR001452	977	992	PR00452	Src homology-3
	IPR001452	994	1003	PR00452	Src homology-3
	IPR001452	1008	1020	PR00452	Src homology-3
HMMPfam	IPR001849	322	413	PF00169	Pleckstrin-like
	IPR001164	437	559	PF01412	Arf GTPase activating protein
	IPR002110	600	635	PF00023	Ankyrin
	IPR002110	636	668	PF00023	Ankyrin
	IPR002110	669	689	PF00023	Ankyrin
	IPR001452	963	1017	PF00018	Src homology-3
HMMSmart	IPR001849	322	415	SM00233	Pleckstrin-like
	IPR001164	437	557	SM00105	Arf GTPase activating protein
	IPR002110	600	632	SM00248	Ankyrin
	IPR002110	636	665	SM00248	Ankyrin
	IPR002110	669	699	SM00248	Ankyrin
	IPR001452	963	1021	SM00326	Src homology-3
ProfileScan	IPR001849	321	413	PS50003	Pleckstrin-like
	IPR001164	437	559	PS50115	Arf GTPase activating protein
	IPR002110	600	691	PS50297	Ankyrin
	IPR002110	636	668	PS50088	Ankyrin
	IPR001452	960	1022	PS50002	Src homology-3

RT-PCR

Experimental conditions

Chromosome No. 2
Experimental conditions

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