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Order Kazusa clone(s) from : |
| Product ID | ORK00058 |
|---|---|
| Accession No | AB002352 |
| Description | zinc finger and BTB domain containing 5 |
| Clone name | hg01842 |
| Vector information | |
| cDNA sequence | DNA sequence (4631 bp) Predicted protein sequence (730 aa) |
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HaloTag ORF Clone |
FHC00058
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| Flexi ORF Clone | FXC00058 |
| Source | Human adult brain |
| Rouge ID |
mKIAA0354
by Kazusa Mouse cDNA Project
|
Length: 4631 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).
| N-terminal truncation | Coding interruption | |
|---|---|---|
| cloned DNA seq | No warning | No warning |
Length: 730 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database
(FASTA output,
Multiple alignment)![]() |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR013069 | 67 | 176 | PF00651 | BTB/POZ |
| IPR007087 | 694 | 717 | PF00096 | Zinc finger | |
| HMMSmart | IPR000210 | 77 | 176 | SM00225 | BTB/POZ-like |
| IPR015880 | 666 | 688 | SM00355 | Zinc finger | |
| IPR015880 | 694 | 714 | SM00355 | Zinc finger | |
| ProfileScan | IPR000210 | 77 | 146 | PS50097 | BTB/POZ-like |
| IPR007087 | 666 | 693 | PS50157 | Zinc finger | |
| IPR007087 | 694 | 726 | PS50157 | Zinc finger | |
| ScanRegExp | IPR007087 | 668 | 688 | PS00028 | Zinc finger |
RT-PCR
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|---|
Experimental conditions| Primer_f | AAGTTGTAACCAGCATAGCAC |
|---|---|
| Primer_r | TTATAGTCTGGCGTGATCATG |
| PCR conditions | 95 °C 30 sec 55 °C 30 sec 72 °C 60 sec 30 cycles![]() |
Chromosome No. 9
Experimental conditions| Panel name | GeneBridge 4 |
|---|---|
| Primer_f | AAGTTGTAACCAGCATAGCAC |
| Primer_r | TTATAGTCTGGCGTGATCATG |
| PCR product length | 112 bp |
| PCR conditions | 95 °C 15 sec 60 °C 60 sec 30 cycles |