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Gene/Protein Characteristic Table for FLJ00185

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Product ID	ORK05107
Accession No	AK074114
Clone name	sj01856
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4601 bp) Predicted protein sequence (824 aa)
Source	Human spleen

Length: 4601 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 824 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR000651	110	166	PF00618	Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
	IPR001895	371	585	PF00617	Guanine-nucleotide dissociation stimulator CDC25
HMMSmart	IPR000651	111	237	SM00229	Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
	IPR001895	370	637	SM00147	Guanine-nucleotide dissociation stimulator CDC25
ProfileScan	IPR000651	108	164	PS50212	Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
	IPR000694	241	356	PS50099	Proline-rich region
	IPR001895	373	635	PS50009	Guanine-nucleotide dissociation stimulator CDC25
	NULL	663	775	PS50324	NULL
ScanRegExp	IPR001895	552	582	PS00720	Guanine-nucleotide dissociation stimulator CDC25

Experimental conditions

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