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Gene/Protein Characteristic Table for KIAA0644

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Product ID	ORK00587
Accession No	AB014544
Description	TLR4 interactor with leucine-rich repeats
Clone name	hj03618
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4933 bp) Predicted protein sequence (887 aa)
HaloTag ORF Clone	FHC00587
Flexi ORF Clone	FXC00587
Source	Human adult brain
Rouge ID	mKIAA0644 by Kazusa Mouse cDNA Project

Length: 4933 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 887 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR001611	161	174	PR00019	Leucine-rich repeat
	IPR001611	376	389	PR00019	Leucine-rich repeat
HMMPfam	IPR001611	160	182	PF00560	Leucine-rich repeat
	IPR001611	184	206	PF00560	Leucine-rich repeat
	IPR001611	208	230	PF00560	Leucine-rich repeat
	IPR001611	232	254	PF00560	Leucine-rich repeat
	IPR001611	256	278	PF00560	Leucine-rich repeat
	IPR001611	306	328	PF00560	Leucine-rich repeat
	IPR001611	330	352	PF00560	Leucine-rich repeat
	IPR001611	354	376	PF00560	Leucine-rich repeat
	IPR001611	378	400	PF00560	Leucine-rich repeat
	IPR001611	402	424	PF00560	Leucine-rich repeat
	IPR000483	463	491	PF01463	Cysteine-rich flanking region
HMMSmart	IPR003591	158	181	SM00369	Leucine-rich repeat
	IPR003591	182	205	SM00369	Leucine-rich repeat
	IPR003591	206	229	SM00369	Leucine-rich repeat
	IPR003591	230	253	SM00369	Leucine-rich repeat
	IPR003591	254	277	SM00369	Leucine-rich repeat
	IPR003591	278	303	SM00369	Leucine-rich repeat
	IPR003591	304	327	SM00369	Leucine-rich repeat
	IPR003591	328	351	SM00369	Leucine-rich repeat
	IPR003591	352	375	SM00369	Leucine-rich repeat
	IPR003591	376	399	SM00369	Leucine-rich repeat
	IPR003591	400	423	SM00369	Leucine-rich repeat
	IPR000483	435	491	SM00082	Cysteine-rich flanking region

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	772	QLLTLALLTVNALLVLLALAAWA	794	PRIMARY	23

RT-PCR

RT-PCR-ELISA

Experimental conditions

Chromosome No. 7
Experimental conditions

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