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Gene/Protein Characteristic Table for KIAA1469

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Product ID	ORK00234
Accession No	AB040902
Description	fibronectin leucine rich transmembrane protein 3, transcript variant 1
Clone name	fj01881
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4723 bp) Predicted protein sequence (662 aa)
HaloTag ORF Clone	FHC00234
Flexi ORF Clone	FXC00234
Source	Human fetal brain
Rouge ID	mKIAA1469 by Kazusa Mouse cDNA Project

Length: 4723 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 662 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR001611	169	182	PR00019	Leucine-rich repeat
	IPR001611	283	296	PR00019	Leucine-rich repeat
HMMPfam	IPR000372	43	70	PF01462	Leucine-rich repeat
	IPR001611	72	95	PF00560	Leucine-rich repeat
	IPR001611	97	115	PF00560	Leucine-rich repeat
	IPR001611	142	166	PF00560	Leucine-rich repeat
	IPR001611	168	186	PF00560	Leucine-rich repeat
	IPR001611	189	211	PF00560	Leucine-rich repeat
	IPR001611	213	237	PF00560	Leucine-rich repeat
	IPR001611	239	257	PF00560	Leucine-rich repeat
	IPR001611	261	283	PF00560	Leucine-rich repeat
	IPR001611	285	307	PF00560	Leucine-rich repeat
	IPR000483	344	369	PF01463	Cysteine-rich flanking region
	IPR003961	418	498	PF00041	Fibronectin
HMMSmart	IPR000372	43	75	SM00013	Leucine-rich repeat
	IPR003591	95	118	SM00369	Leucine-rich repeat
	IPR003591	140	165	SM00369	Leucine-rich repeat
	IPR003591	169	189	SM00369	Leucine-rich repeat
	IPR003591	211	236	SM00369	Leucine-rich repeat
	IPR003591	237	260	SM00369	Leucine-rich repeat
	IPR003591	261	282	SM00369	Leucine-rich repeat
	IPR003591	283	306	SM00369	Leucine-rich repeat
	IPR000483	318	369	SM00082	Cysteine-rich flanking region
ProfileScan	IPR003961	419	514	PS50853	Fibronectin

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	12	LTMISAAWSIFLIGTKIGLFLQV	34	PRIMARY	23
	2	542	LAAIIGGAVALVTIALLALVCWY	564	PRIMARY	23

RT-PCR-ELISA

Experimental conditions

Chromosome No. 20
Experimental conditions

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