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Gene/Protein Characteristic Table for KIAA0611

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Product ID	ORK00109
Accession No	AB014511
Description	ATPase, class II, type 9A
Clone name	hg00483
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (7176 bp) Predicted protein sequence (912 aa)
HaloTag ORF Clone	FHC00109
Flexi ORF Clone	FXC00109
Source	Human adult brain
Rouge ID	mKIAA0611 by Kazusa Mouse cDNA Project

Length: 7176 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 912 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR001757	254	268	PR00119	ATPase
	IPR001757	534	544	PR00119	ATPase
	IPR001757	648	667	PR00119	ATPase
HMMPfam	IPR005834	250	671	PF00702	Haloacid dehalogenase-like hydrolase
HMMTigr	IPR006539	39	912	TIGR01652	Phospholipid-translocating P-type ATPase
	IPR001757	168	275	TIGR01494	ATPase
	IPR001757	504	561	TIGR01494	ATPase
	IPR001757	621	737	TIGR01494	ATPase
ScanRegExp	IPR001757	256	262	PS00154	ATPase

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	61	NQFKYFFNLYFLLLACSQFVPEM	83	SECONDARY	23
	2	90	TYWVPLGFVLAVTVIREAVEEIR	112	SECONDARY	23
	3	162	DLEVNCLTKILFGALVVVSLVMV	184	PRIMARY	23
	4	194	YLQIIRFLLLFSNIIPISLRVNL	216	PRIMARY	23
	5	708	SQFVIHRSLCISTMQAVFSSVFY	730	SECONDARY	23
	6	742	IIGYSTIYTMFPVFSLVLDKDVK	764	SECONDARY	23
	7	787	KTFLIWVLISIYQGSTIMYGALL	809	PRIMARY	23
	8	817	HIVAISFTSLILTELLMVALTIQ	839	PRIMARY	23
	9	844	LMTVAELLSLACYIASLVFLHEF	866	PRIMARY	23
	10	874	TLSFLWKVSVITLVSCLPLYVLK	896	PRIMARY	23

RT-PCR

RT-PCR-ELISA

Experimental conditions

Chromosome No. 20
Experimental conditions

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