Gene/Protein Characteristic Table for KIAA1061
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Product ID ORK05236
Accession No AB028984
Description follistatin-like 4
Clone name hj00491
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4719 bp)
Predicted protein sequence (693 aa)
Source Human adult brain
Rouge ID mKIAA1061 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 4719 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 2635 bp
Genome contig ID gi51511721r_132460051
PolyA signal sequence
(AATAAA,-17)
+----*----+----*----+----*----+----
CCCCCTCAGTCATTTTGAAATAAAATTAATTTTAC
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAAAATTCGATAGTTTTTTTTTTCCCAAAATGACAAAAAATCTGCACCTG

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 5 r 132560051 132680207 12 99.3 Perfect prediction
Features of the protein sequence
Description

Length: 693 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
NP_055897 0 100.0 follistatin-lik...
Homo sapiens
EAW62292 0 99.9 follistatin-lik...
Homo sapiens
Q6MZW2 0 99.6 Follistatin-rel...
Homo sapiens
XP_517931 0 99.3 follistatin-lik...
Pan troglodytes
XP_001107348 0 97.3 similar to foll...
Macaca mulatta
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB033089 5.3e-170 60.5 KIAA1263
D86983 1.3e-10 29.1 KIAA0230
AB018349 1.3e-08 25.7 KIAA0806
AB002341 2.7e-08 29.3 KIAA0343
AB037776 4.1e-08 30.3 KIAA1355
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR013151 114 174 PF00047 Immunoglobulin
IPR013098 192 281 PF07679 Immunoglobulin I-set
HMMSmart IPR003599 106 189 SM00409 Immunoglobulin subtype
IPR003598 112 179 SM00408 Immunoglobulin subtype 2
IPR003599 198 282 SM00409 Immunoglobulin subtype
IPR003598 204 271 SM00408 Immunoglobulin subtype 2
ProfileScan IPR002048 25 60 PS50222 Calcium-binding EF-hand
IPR007110 102 189 PS50835 Immunoglobulin-like
IPR007110 192 277 PS50835 Immunoglobulin-like
IPR007110 659 693 PS50835 Immunoglobulin-like
ScanRegExp IPR002048 38 50 PS00018 Calcium-binding EF-hand
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f CAGCAGAGGTTCATGGGACAC
Primer_r CATTAGGAGGATTACCGGCTG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 5
Experimental conditions
Panel name GeneBridge 4
Primer_f CAGCAGAGGTTCATGGGACAC
Primer_r CATTAGGAGGATTACCGGCTG
PCR product length 100 bp
PCR conditions 95 °C15 sec66 °C60 sec30 cycles
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