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Gene/Protein Characteristic Table for KIAA0590

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Product ID	ORK00104
Accession No	AB011162
Description	intraflagellar transport 140
Clone name	hj02755
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4962 bp) Predicted protein sequence (1468 aa)
Flexi ORF Clone	FXC00104
Source	Human adult brain
Rouge ID	mKIAA0590 by Kazusa Mouse cDNA Project

Length: 4962 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1468 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR001680	99	137	PF00400	WD40 repeat
HMMSmart	IPR001680	61	95	SM00320	WD40 repeat
	IPR001680	97	137	SM00320	WD40 repeat
	IPR001680	320	358	SM00320	WD40 repeat
ProfileScan	IPR001680	63	146	PS50294	WD40 repeat
	IPR001680	105	146	PS50082	WD40 repeat

RT-PCR

Experimental conditions

Chromosome No. 16
Experimental conditions

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