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Gene/Protein Characteristic Table for FLJ00306

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Product ID	ORK07509
Accession No	AK160373
Clone name	sh05582
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (3198 bp) Predicted protein sequence (278 aa)
Source	Human spleen
Rouge ID	mFLJ00306 by Kazusa Mouse cDNA Project

Length: 3198 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 278 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR007086	160	173	PR00048	Zn-finger
	IPR007086	176	185	PR00048	Zn-finger
HMMPfam	IPR007087	21	43	PF00096	Zn-finger
	IPR007087	49	71	PF00096	Zn-finger
	IPR007087	77	99	PF00096	Zn-finger
	IPR007087	105	127	PF00096	Zn-finger
	IPR007087	133	155	PF00096	Zn-finger
	IPR007087	161	183	PF00096	Zn-finger
	IPR007087	189	212	PF00096	Zn-finger
HMMSmart	IPR007087	21	43	SM00355	Zn-finger
	IPR007087	49	71	SM00355	Zn-finger
	IPR007087	77	99	SM00355	Zn-finger
	IPR007087	105	127	SM00355	Zn-finger
	IPR007087	133	155	SM00355	Zn-finger
	IPR007087	161	183	SM00355	Zn-finger
	IPR007087	189	212	SM00355	Zn-finger
ProfileScan	IPR007087	21	48	PS50157	Zn-finger
	IPR007087	49	76	PS50157	Zn-finger
	IPR007087	77	104	PS50157	Zn-finger
	IPR007087	105	132	PS50157	Zn-finger
	IPR007087	133	160	PS50157	Zn-finger
	IPR007087	161	188	PS50157	Zn-finger
	IPR007087	189	212	PS50157	Zn-finger
ScanRegExp	IPR007087	23	43	PS00028	Zn-finger
	IPR007087	51	71	PS00028	Zn-finger
	IPR007087	79	99	PS00028	Zn-finger
	IPR007087	107	127	PS00028	Zn-finger
	IPR007087	135	155	PS00028	Zn-finger
	IPR007087	163	183	PS00028	Zn-finger
	IPR007087	191	212	PS00028	Zn-finger

Experimental conditions

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