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Gene/Protein Characteristic Table for FLJ00218

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Product ID	ORK05119
Accession No	AK074145
Clone name	sj05575
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4116 bp) Predicted protein sequence (174 aa)
Source	Human spleen

Length: 4116 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 174 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR001478	52	132	PF00595	PDZ/DHR/GLGF domain
HMMSmart	IPR001478	61	135	SM00228	PDZ/DHR/GLGF domain
ProfileScan	IPR001478	52	135	PS50106	PDZ/DHR/GLGF domain

Experimental conditions

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