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Gene/Protein Characteristic Table for KIAA0444

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Product ID	ORK04547
Accession No	AB007913
Description	chromodomain helicase DNA binding protein 5
Clone name	hg00035
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (6618 bp) Predicted protein sequence (978 aa)
Source	Human adult brain
Rouge ID	mKIAA0444 by Kazusa Mouse cDNA Project

Length: 6618 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 978 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR000330	5	23	PF00176	SNF2-related
	IPR001650	83	162	PF00271	DNA/RNA helicase
	IPR009463	319	383	PF06465	Protein of unknown function DUF1087
	IPR009462	396	555	PF06461	Protein of unknown function DUF1086
	IPR012957	754	927	PF08074	CHD
HMMSmart	IPR001650	78	162	SM00490	DNA/RNA helicase
ProfileScan	IPR001650	52	217	PS51194	DNA/RNA helicase

Experimental conditions

Chromosome No. 1
Experimental conditions

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