Gene/Protein Characteristic Table for FLJ00265
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Product ID ORK06082
Accession No AK122581
Clone name sj01842
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4752 bp)
Predicted protein sequence (155 aa)
Source Human spleen
Features of the cloned cDNA sequence
Description

Length: 4752 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Features of the protein sequence
Description

Length: 155 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAC56922 7.4e-62 100.0 FLJ00265 protei...
Homo sapiens
Q86YV6 1.8e-52 100.0 Myosin light ch...
Homo sapiens
AAI32834 1.8e-52 100.0 Myosin light ch...
Homo sapiens
XP_527218 2.8e-52 99.3 hypothetical pr...
Pan troglodytes
XP_001090801 6e-51 99.2 similar to Myos...
Macaca mulatta
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB037718 6.5e-14 45.3 KIAA1297
AB023185 4.4e-12 42.6 KIAA0968
AB046859 5.7e-11 38.7 KIAA1639
AB002367 1.5e-10 37.5 KIAA0369
D43636 2.9e-10 35.5 KIAA0096
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR000719 20 127 PD000001 Protein kinase
HMMSmart IPR002290 7 128 SM00220 Serine/threonine protein kinase
ProfileScan IPR000719 1 128 PS50011 Protein kinase

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 1 QCSRFLIDTSILPLCLLN 18 SECONDARY 18
2 52 DMWSVGVIAYMLLSGLSPFLGDN 74 PRIMARY 23
Experimental conditions
Primer_f
Primer_r
PCR conditions test
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