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Product ID | ORK01660 |
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Accession No | D80011 |
Description | StAR-related lipid transfer (START) domain containing 8, transcript variant 2 |
Clone name | ha02928 |
Vector information | |
cDNA sequence | DNA sequence (4824 bp) Predicted protein sequence (1132 aa) |
HaloTag ORF Clone |
FHC01660
|
Flexi ORF Clone | FXC01660 |
Source | Myeloblast cell line (KG-1) |
Rouge ID |
mKIAA0189
by Kazusa Mouse cDNA Project
|
N-terminal truncation | Coding interruption | |
---|---|---|
cloned DNA seq | No warning | Warning |
Length of 3'UTR | 1415 bp |
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Genome contig ID | gi89161218f_67730218 |
PolyA signal sequence (AATAAA,-20) |
+----*----+----*----+----*----+---- |
Flanking genome sequence (132184 - 132233) |
----+----*----+----*----+----*----+----*----+----* |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.Result of homology search against HUGE database (FASTA output, Multiple alignment)
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Search method | interpro_ID | From | To | Entry | Definition |
---|---|---|---|---|---|
HMMPfam | IPR000198 | 695 | 844 | PF00620 | RhoGAP |
IPR002913 | 927 | 1129 | PF01852 | Lipid-binding START | |
HMMSmart | IPR000198 | 692 | 883 | SM00324 | RhoGAP |
IPR002913 | 927 | 1129 | SM00234 | Lipid-binding START | |
ProfileScan | IPR000198 | 682 | 886 | PS50238 | RhoGAP |
IPR002913 | 931 | 1101 | PS50848 | Lipid-binding START |
Panel name | Genebridge 4 |
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Primer_f | TAACATAACAGCCCCTTTCTC |
Primer_r | AGTGGGACAGAACAGGTTTGG |
PCR product length | 107 bp |
PCR conditions | 95 °C15 sec60 °C60 sec30 cycles |